Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942196.1_cds_XP_016485732.1_76632
CDS Infomation

[gene=LOC107806139] [db_xref=GeneID:107806139] [protein=eukaryotic translation initiation factor 3 subunit B-like] [protein_id=XP_016485732.1] [location=join(5973..6094,6939..7176,7292..7438,7543..7671,7864..7992,8065..8148,8225..8349,8526..8718,8807..9112,9292..9849)] [gbkey=CDS]
Sequence

ATGGCGGACGTTACGTCTATGGGAGAAATCACAGCCATAGCCGCTAGGATTGGTGTGGAT
CTTTCCCAAATCGATCTTGACTCCATTCATCTTCCTCCTGGTGAAGATTGTGGCATACCC
AGTGATGATGATGACTTAATGGAGGAGGACCCCTTGGAGTTTGATGCTGGTTTTGGGAAC
ATACTGGTGGTGGACAATCTTCCTGTGGTGCCTAAAGAGAAATTTGAGAAGTTGGAAGGA
GTAGTTCGGAAAATTTACAGCCAACTTGGTGTTATTAAGGAGGATGGTCTCTGGATGCCT
GTTGATCCTGAGACTCAGAAAACCCTAGGGTACTGCTTCATCGAGTATAATACTCCTCAG
GAAGCTGAGCTGAGTAAGGAGAAGACACATGGATACAAGTTAGATAGGTCGCATATATTT
GCTGTTAACATGTTTGATGACATTGAGAAATTCCTGAAAGTTCCTGATGAGTGGGCTCCA
CCAGAGATCAAGCCTTATGTTCCAGGGGAGAATCTGCAACAGTGGCTTACTGATGAGAAA
GCTAGAGACCAGTTTGTGATTCGGGCTGGCAATGACACAGAGGTCCTCTGGAATGATGCA
AGACAGTTGAAGCCTGAGCTTGTTTACAAACGTTCTTTCTGGACTGAGAGTTTTGTGCAA
TGGTCCCCTCTGGGAACGTATTTGGCAACAGTTCACAGACAAGGTGCTGCAATTTGGGGT
GGTGCCACCACTTTCAACCGTCTGATGCGATATGCACATCCACAGGTAAAACTGATTGAT
TTCTCCCTTGCTGAGAGATATCTGGTGACATACAGCAGCCATGAACCAAGTAATCCCCGT
GACACTCATAGGGTTGTGCTAAATATTTTTGATGTGAGAACTGGGAAAGTGATGAGAGAT
TTCAAGGGAAGTGCCGATGAATTTGCAGTTGGAGGAACTGGAGGTGTTACTGGTGTGTCG
TGGCCAGTTTTTAGGTGGAGTGGTGGTAAAGAAGACAAGTACTTTGCAAGAATAGGAAAG
AATGTCATCTCTGTTTATGAAACAGAGACGTTCTCTCTTATTGACAAGAAATCTATCAAG
GTTGAAAATGTTATGGATTTTAGCTGGTCGCCAGCAGATCCAATTCTTGCACTTTTTGTT
CCTGAATGCGGAAATCAACCTGCCAGGGTCAGTCTTGTGCAAATCCCAAGCAAAGAGGAG
TTGAGGCAGAAGAATCTCTTCAGTGTTAGTGATTGCAAAATGTATTGGCAAAGCAATGGA
GACTACCTTGCTGTCAAAGTTGATCGGTACACGAAGACTAAGAAAAGCACTTACACTGGT
TTTGAGCTGTTCAGAATCAAAGAACGGGACATTCCGATTGAGGTTTTGGAGCTTGACAAC
AAGAACGACAAAATCATTGCATTTGCCTGGGAGCCAAAGGGTCACAGATTTGCTGTTATC
CATGGCGACAACCCTAGGCCAGACATCAGTTTCATGCAGTCGCAGAACGGCCAATTACTG
TTTTCCTGTTATCTTTCGAATGCTGCGTGTATATTTGACGCAACTTCCCTGTTCATCCTT
TCGTATTTGCTACGTGGTTGTATGCTCTGCTTGGCTATGCCTGTTTTTTGGAAGGAACAT
GCTTATATTCATTACATGACCTGCTGGATACTCATATATATAGCAAATGCTTCTTGTTTG
GTGCAGTATTTGTGGCGCCCCAGGCCACCATCTTTCTTGAGCAAGGAGAAAGAGGAAGAG
ATCGCTAAGAACTTGAAAAGATACAGCAAGAAGTATGAGGCAGAGGATCAGGATGTTTCA
TTGCAATTGAGTGAGCAAGATCGTGAGAAACGGAAGAAGTTGAAAGAAGAATGGGAAGCA
TGGATTAATGAGTGGAAGCGGCTGCATGAAGAGGAGAAAATGGAGAGGCAGAAGTTGCGT
GATGGAGAAGCTAGTGATGAAGAGGAGGAATACGAGGCAAAGGAAGTTGAAGTCGAGGAA
ATAATAAATGTTACTGAGGAGATTATTCCTTTTGAAGAGAGCCAACAGTGA

Peptide Sequence

PEP ID

XP_016485732.1
PEP Infomation

PREDICTED: eukaryotic translation initiation factor 3 subunit B-like [Nicotiana tabacum]
Sequence

MADVTSMGEITAIAARIGVDLSQIDLDSIHLPPGEDCGIPSDDDDLMEEDPLEFDAGFGN
ILVVDNLPVVPKEKFEKLEGVVRKIYSQLGVIKEDGLWMPVDPETQKTLGYCFIEYNTPQ
EAELSKEKTHGYKLDRSHIFAVNMFDDIEKFLKVPDEWAPPEIKPYVPGENLQQWLTDEK
ARDQFVIRAGNDTEVLWNDARQLKPELVYKRSFWTESFVQWSPLGTYLATVHRQGAAIWG
GATTFNRLMRYAHPQVKLIDFSLAERYLVTYSSHEPSNPRDTHRVVLNIFDVRTGKVMRD
FKGSADEFAVGGTGGVTGVSWPVFRWSGGKEDKYFARIGKNVISVYETETFSLIDKKSIK
VENVMDFSWSPADPILALFVPECGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNG
DYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVI
HGDNPRPDISFMQSQNGQLLFSCYLSNAACIFDATSLFILSYLLRGCMLCLAMPVFWKEH
AYIHYMTCWILIYIANASCLVQYLWRPRPPSFLSKEKEEEIAKNLKRYSKKYEAEDQDVS
LQLSEQDREKRKKLKEEWEAWINEWKRLHEEEKMERQKLRDGEASDEEEEYEAKEVEVEE
IINVTEEIIPFEESQQ

Transcript Sequence

Gene sequence data has not been registered.